-
recipe
bioconductor-starbiotrek¶ This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
- Homepage
https://bioconductor.org/packages/3.9/bioc/html/StarBioTrek.html
- License
GPL (>= 3)
- Recipe
- Links
biotools: starbiotrek, doi: 10.1186/s12918-015-0211-x
-
package
bioconductor-starbiotrek¶ 
- Versions
1.8.1-1, 1.8.1-0, 1.6.0-0, 1.4.0-0
- Depends bioconductor-annotationdbi
>=1.44.0,<1.45.0
- Depends bioconductor-keggrest
>=1.22.0,<1.23.0
- Depends bioconductor-org.hs.eg.db
>=3.7.0,<3.8.0
- Depends bioconductor-spidermir
>=1.12.0,<1.13.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-e1071
- Depends r-igraph
- Depends r-rocr
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-starbiotrek
and update with:
conda update bioconductor-starbiotrek
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-starbiotrek:<tag>
(see bioconductor-starbiotrek/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-starbiotrek/README.html)