recipe bioconductor-summarizedbenchmark

This package defines the BenchDesign and SummarizedBenchmark classes for building, executing, and evaluating benchmark experiments of computational methods. The SummarizedBenchmark class extends the RangedSummarizedExperiment object, and is designed to provide infrastructure to store and compare the results of applying different methods to a shared data set. This class provides an integrated interface to store metadata such as method parameters and software versions as well as ground truths (when these are available) and evaluation metrics.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/SummarizedBenchmark.html

License

GPL (>= 3)

Recipe

/bioconductor-summarizedbenchmark/meta.yaml

package bioconductor-summarizedbenchmark

(downloads) docker_bioconductor-summarizedbenchmark

Versions

2.2.2-0, 2.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-summarizedbenchmark

and update with:

conda update bioconductor-summarizedbenchmark

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-summarizedbenchmark:<tag>

(see bioconductor-summarizedbenchmark/tags for valid values for <tag>)