recipe bioconductor-summix

Summix: A method to estimate and adjust for population structure in genetic summary data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/Summix.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-summix/meta.yaml

This package contains the Summix method for estimating and adjusting for ancestry in genetic summary allele frequency data. The function summix estimates reference ancestry proportions using a mixture model. The adjAF function produces ancestry adjusted allele frequencies for an observed sample with ancestry proportions matching a target person or sample.

package bioconductor-summix

(downloads) docker_bioconductor-summix

Versions:

2.4.0-02.0.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-summix

and update with:

conda update bioconductor-summix

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-summix:<tag>

(see bioconductor-summix/tags for valid values for <tag>)

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