recipe bioconductor-swath2stats

Transform and Filter SWATH Data for Statistical Packages

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/SWATH2stats.html

License:

GPL-3

Recipe:

/bioconductor-swath2stats/meta.yaml

Links:

biotools: swath2stats

This package is intended to transform SWATH data from the OpenSWATH software into a format readable by other statistics packages while performing filtering, annotation and FDR estimation.

package bioconductor-swath2stats

Versions:

1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.12.1-0,  1.10.2-0, 

1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.12.1-0,  1.10.2-0,  1.8.1-0,  1.6.1-0

Depends:

• bioconductor-biomart >=2.50.0,<2.51.0

• r-base >=4.1,<4.2.0a0

• r-data.table

• r-ggplot2

• r-reshape2

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-swath2stats

and update with:

conda update bioconductor-swath2stats

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-swath2stats:<tag>

(see bioconductor-swath2stats/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-swath2stats/README.html)