recipe bioconductor-tbsignatureprofiler

Profile RA-Seq Data Using TB Pathway Signatures

Homepage

https://bioconductor.org/packages/3.11/bioc/html/TBSignatureProfiler.html

License

MIT + file LICENSE

Recipe

/bioconductor-tbsignatureprofiler/meta.yaml

Signatures of TB progression, TB disease, and other TB disease states have been created. This package makes it easy to profile RNA-Seq data using these signatures and common signature profiling tools including ASSIGN, GSVA, and ssGSEA.

package bioconductor-tbsignatureprofiler

(downloads) docker_bioconductor-tbsignatureprofiler

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tbsignatureprofiler

and update with:

conda update bioconductor-tbsignatureprofiler

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tbsignatureprofiler:<tag>

(see bioconductor-tbsignatureprofiler/tags for valid values for <tag>)