recipe bioconductor-tcgaworkflowdata

Data for TCGA Workflow

Homepage

https://bioconductor.org/packages/3.12/data/experiment/html/TCGAWorkflowData.html

License

GPL-3

Recipe

/bioconductor-tcgaworkflowdata/meta.yaml

This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".

package bioconductor-tcgaworkflowdata

Versions

1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0

Depends

• bioconductor-summarizedexperiment >=1.20.0,<1.21.0

• curl >=7.71.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tcgaworkflowdata

and update with:

conda update bioconductor-tcgaworkflowdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tcgaworkflowdata:<tag>

(see bioconductor-tcgaworkflowdata/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tcgaworkflowdata/README.html)