recipe bioconductor-tenxplore

ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/tenXplore.html

License:

Artistic-2.0

Recipe:

/bioconductor-tenxplore/meta.yaml

Perform ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics.

package bioconductor-tenxplore

Versions:

1.20.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-ontoproc >=1.20.0,<1.21.0

• bioconductor-org.mm.eg.db >=3.16.0,<3.17.0

• bioconductor-restfulse >=1.20.0,<1.21.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-matrixstats

• r-shiny

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tenxplore

and update with:

conda update bioconductor-tenxplore

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tenxplore:<tag>

(see bioconductor-tenxplore/tags for valid values for <tag>)

Download stats

Link to this page

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