recipe bioconductor-tfea.chip

Analyze Transcription Factor Enrichment

Homepage

https://bioconductor.org/packages/3.11/bioc/html/TFEA.ChIP.html

License

Artistic-2.0

Recipe

/bioconductor-tfea.chip/meta.yaml

Package to analize transcription factor enrichment in a gene set using data from ChIP-Seq experiments.

package bioconductor-tfea.chip

Versions

1.8.0-0,  1.6.0-0,  1.4.2-0,  1.2.1-0

Depends

• bioconductor-biomart >=2.44.0,<2.45.0

• bioconductor-genomicfeatures >=1.40.0,<1.41.0

• bioconductor-genomicranges >=1.40.0,<1.41.0

• bioconductor-iranges >=2.22.0,<2.23.0

• bioconductor-org.hs.eg.db >=3.11.0,<3.12.0

• r-base >=4.0,<4.1.0a0

• r-dplyr

• r-r.utils

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tfea.chip

and update with:

conda update bioconductor-tfea.chip

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tfea.chip:<tag>

(see bioconductor-tfea.chip/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tfea.chip/README.html)