recipe bioconductor-tidybulk

Brings transcriptomics to the tidyverse

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/tidybulk.html

License:

GPL-3

Recipe:

/bioconductor-tidybulk/meta.yaml

This is a collection of utility functions that allow to perform exploration of and calculations to RNA sequencing data, in a modular, pipe-friendly and tidy fashion.

package bioconductor-tidybulk

Versions:

1.10.0-0,  1.6.1-0,  1.4.0-0,  1.2.0-1,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-preprocesscore >=1.60.0,<1.61.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-crayon

• r-dplyr

• r-lifecycle

• r-magrittr

• r-purrr

• r-readr

• r-rlang

• r-scales

• r-stringi

• r-stringr

• r-tibble

• r-tidyr

• r-tidyselect

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tidybulk

and update with:

conda update bioconductor-tidybulk

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tidybulk:<tag>

(see bioconductor-tidybulk/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tidybulk/README.html)