recipe bioconductor-toast

Tools for the analysis of heterogeneous tissues

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/TOAST.html

License:

GPL-2

Recipe:

/bioconductor-toast/meta.yaml

This package is devoted to analyzing high-throughput data (e.g. gene expression microarray, DNA methylation microarray, RNA-seq) from complex tissues. Current functionalities include 1. detect cell-type specific or cross-cell type differential signals 2. tree-based differential analysis 3. improve variable selection in reference-free deconvolution 4. partial reference-free deconvolution with prior knowledge.

package bioconductor-toast

(downloads) docker_bioconductor-toast

Versions:

1.12.0-01.7.1-01.6.0-01.4.0-11.4.0-01.2.0-01.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-toast

and update with:

conda update bioconductor-toast

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-toast:<tag>

(see bioconductor-toast/tags for valid values for <tag>)

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