recipe bioconductor-toast

Tools for the analysis of heterogeneous tissues

Homepage

https://bioconductor.org/packages/3.11/bioc/html/TOAST.html

License

GPL-2

Recipe

/bioconductor-toast/meta.yaml

This package is devoted to analyzing high-throughput data (e.g. gene expression microarray, DNA methylation microarray, RNA-seq) from complex tissues. Current functionalities include 1. detect cell-type specific or cross-cell type differential signals 2. improve variable selection in reference-free deconvolution 3. partial reference-free deconvolution with prior knowledge.

package bioconductor-toast

(downloads) docker_bioconductor-toast

Versions

1.2.0-0, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-toast

and update with:

conda update bioconductor-toast

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-toast:<tag>

(see bioconductor-toast/tags for valid values for <tag>)