recipe bioconductor-topdownr

The topdownr package allows automatic and systemic investigation of fragment conditions. It creates Thermo Orbitrap Fusion Lumos method files to test hundreds of fragmentation conditions. Additionally it provides functions to analyse and process the generated MS data and determine the best conditions to maximise overall fragment coverage.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/topdownr.html

License

GPL (>= 3)

Recipe

/bioconductor-topdownr/meta.yaml

package bioconductor-topdownr

(downloads) docker_bioconductor-topdownr

Versions

1.4.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-topdownr

and update with:

conda update bioconductor-topdownr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-topdownr:<tag>

(see bioconductor-topdownr/tags for valid values for <tag>)