- recipe bioconductor-transformgampoi
Variance Stabilizing Transformation for Gamma-Poisson Models
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/transformGamPoi.html
- License:
GPL-3
- Recipe:
Variance-stabilizing transformations help with the analysis of heteroskedastic data (i.e., data where the variance is not constant, like count data). This package provide two types of variance stabilizing transformations: (1) methods based on the delta method (e.g., 'acosh', 'log(x+1)'), (2) model residual based (Pearson and randomized quantile residuals).
- package bioconductor-transformgampoi¶
-
- Versions:
1.0.0-0
- Depends:
bioconductor-delayedarray
>=0.20.0,<0.21.0
bioconductor-glmgampoi
>=1.6.0,<1.7.0
bioconductor-hdf5array
>=1.22.0,<1.23.0
bioconductor-matrixgenerics
>=1.6.0,<1.7.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-transformgampoi
and update with:
conda update bioconductor-transformgampoi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-transformgampoi:<tag>
(see bioconductor-transformgampoi/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-transformgampoi/README.html)