bioconductor-trio¶
Testing SNPs and SNP interactions with a genotypic TDT. This package furthermore contains functions for computing pairwise values of LD measures and for identifying LD blocks, as well as functions for setting up matched case pseudo-control genotype data for case-parent trios in order to run trio logic regression, for imputing missing genotypes in trios, for simulating case-parent trios with disease risk dependent on SNP interaction, and for power and sample size calculation in trio data.
| Home | http://bioconductor.org/packages/3.7/bioc/html/trio.html |
| Versions | 3.14.0, 3.16.0, 3.18.0 |
| License | LGPL-2 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-trio |
| Links | biotools: trio, doi: 10.1038/nmeth.3252 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-trio
and update with:
conda update bioconductor-trio
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-trio.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-trio/README.html)
