- recipe bioconductor-tuberculosis
Tuberculosis Gene Expression Data for Machine Learning
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/tuberculosis.html
- License:
Artistic-2.0
- Recipe:
The tuberculosis R/Bioconductor package features tuberculosis gene expression data for machine learning. All human samples from GEO that did not come from cell lines, were not taken postmortem, and did not feature recombination have been included. The package has more than 10,000 samples from both microarray and sequencing studies that have been processed from raw data through a hyper-standardized, reproducible pipeline.
- package bioconductor-tuberculosis¶
-
- Versions:
1.4.0-0
,1.0.0-1
,1.0.0-0
- Depends:
bioconductor-annotationhub
>=3.6.0,<3.7.0
bioconductor-data-packages
>=20221108
bioconductor-experimenthub
>=2.6.0,<2.7.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-tuberculosis
and update with:
conda update bioconductor-tuberculosis
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-tuberculosis:<tag>
(see bioconductor-tuberculosis/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-tuberculosis/README.html)