Package Recipe 'bioconductor-txdb.athaliana.biomart.plantsmart51'

recipe bioconductor-txdb.athaliana.biomart.plantsmart51

Annotation package for TxDb object(s)

Homepage:: https://bioconductor.org/packages/3.16/data/annotation/html/TxDb.Athaliana.BioMart.plantsmart51.html
License:: Artistic-2.0
Recipe:: /bioconductor-txdb.athaliana.biomart.plantsmart51/meta.yaml

Exposes an annotation databases generated from BioMart by exposing these as TxDb objects. This package is for Arabidopsis thaliana (taxID: 3702). The BioMart plantsmart release number is 51.

package bioconductor-txdb.athaliana.biomart.plantsmart51¶

Versions:

0.99.0-2, 0.99.0-1, 0.99.0-0

Depends:

bioconductor-annotationdbi >=1.60.0,<1.61.0
bioconductor-data-packages >=20221103
bioconductor-genomicfeatures >=1.50.0,<1.51.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-txdb.athaliana.biomart.plantsmart51

and update with:

conda update bioconductor-txdb.athaliana.biomart.plantsmart51

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-txdb.athaliana.biomart.plantsmart51:<tag>

(see bioconductor-txdb.athaliana.biomart.plantsmart51/tags for valid values for <tag>)

Download stats¶

Link to this page¶

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