Package Recipe 'bioconductor-txdb.mmusculus.ucsc.mm39.refgene'

recipe bioconductor-txdb.mmusculus.ucsc.mm39.refgene

Annotation package for TxDb object(s)

Homepage:: https://bioconductor.org/packages/3.16/data/annotation/html/TxDb.Mmusculus.UCSC.mm39.refGene.html
License:: Artistic-2.0
Recipe:: /bioconductor-txdb.mmusculus.ucsc.mm39.refgene/meta.yaml

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects

package bioconductor-txdb.mmusculus.ucsc.mm39.refgene¶

Versions:

3.12.0-5, 3.12.0-4, 3.12.0-3, 3.12.0-2, 3.12.0-1, 3.12.0-0

Depends:

bioconductor-annotationdbi >=1.60.0,<1.61.0
bioconductor-data-packages >=20221103
bioconductor-genomicfeatures >=1.50.0,<1.51.0
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-txdb.mmusculus.ucsc.mm39.refgene

and update with:

conda update bioconductor-txdb.mmusculus.ucsc.mm39.refgene

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-txdb.mmusculus.ucsc.mm39.refgene:<tag>

(see bioconductor-txdb.mmusculus.ucsc.mm39.refgene/tags for valid values for <tag>)

Download stats¶

Link to this page¶

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