- recipe bioconductor-varianttoolsdata
Data for the VariantTools tutorial
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/VariantToolsData.html
- License:
Artistic-2.0
- Recipe:
Data from the sequencing of a 50/50 mixture of HapMap trio samples NA12878 (CEU) and NA19240 (YRI), subset to the TP53 region.
- package bioconductor-varianttoolsdata¶
-
- Versions:
1.22.0-0
,1.18.0-1
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.22.0-0
,1.18.0-1
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.0-0
- Depends:
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-data-packages
>=20221108
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-variantannotation
>=1.44.0,<1.45.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-varianttoolsdata
and update with:
conda update bioconductor-varianttoolsdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-varianttoolsdata:<tag>
(see bioconductor-varianttoolsdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-varianttoolsdata/README.html)