recipe bioconductor-yamss

Tools for high-throughput metabolomics

Homepage

https://bioconductor.org/packages/3.11/bioc/html/yamss.html

License

Artistic-2.0

Recipe

/bioconductor-yamss/meta.yaml

Links

biotools: yamss

Tools to analyze and visualize high-throughput metabolomics data aquired using chromatography-mass spectrometry. These tools preprocess data in a way that enables reliable and powerful differential analysis.

package bioconductor-yamss

Versions

1.14.0-0, 1.12.0-0, 1.10.0-1, 1.8.1-0, 1.4.0-0

Depends

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-ebimage >=4.30.0,<4.31.0

• bioconductor-iranges >=2.22.0,<2.23.0

• bioconductor-limma >=3.44.0,<3.45.0

• bioconductor-mzr >=2.22.0,<2.23.0

• bioconductor-s4vectors >=0.26.0,<0.27.0

• bioconductor-summarizedexperiment >=1.18.0,<1.19.0

• r-base >=4.0,<4.1.0a0

• r-data.table

• r-matrix

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-yamss

and update with:

conda update bioconductor-yamss

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-yamss:<tag>

(see bioconductor-yamss/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-yamss/README.html)