recipe bioconductor-yapsa

This package provides functions and routines useful in the analysis of somatic signatures (cf. L. Alexandrov et al., Nature 2013). In particular, functions to perform a signature analysis with known signatures (LCD = linear combination decomposition) and a signature analysis on stratified mutational catalogue (SMC = stratify mutational catalogue) are provided.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/YAPSA.html

License

GPL-3

Recipe

/bioconductor-yapsa/meta.yaml

Links

biotools: yapsa, doi: 10.1038/nmeth.3252

package bioconductor-yapsa

(downloads) docker_bioconductor-yapsa

Versions

1.8.0-0, 1.6.0-0, 1.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-yapsa

and update with:

conda update bioconductor-yapsa

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-yapsa:<tag>

(see bioconductor-yapsa/tags for valid values for <tag>)