biopet

downloads

Biopet (Bio Pipeline Execution Toolkit) is the main pipeline development framework of the LUMC Sequencing Analysis Support Core team.

Home https://github.com/biopet/biopet
Versions 0.7.0, 0.8.0, 0.9.0
License https://github.com/biopet/biopet/blob/develop/biopet-core/src/main/resources/nl/lumc/sasc/biopet/License.txt
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/biopet

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install biopet

and update with:

conda update biopet

docker

A Docker container is available at https://quay.io/repository/biocontainers/biopet.