recipe blastmining

blastMining: Mining NCBI BLAST outputs

Homepage:

https://github.com/NuruddinKhoiry/blastMining

Documentation:

https://github.com/NuruddinKhoiry/blastMining/blob/master/README.md

License:

GPL3 / GNU GENERAL PUBLIC V3

Recipe:

/blastmining/meta.yaml

Links:

biotools: blastMining, doi: 10.5281/zenodo.7431488

package blastmining

Versions:

1.2.0-0,  1.1.0-0,  1.0.0-0

Depends:

• blast >=2.12.0

• csvtk

• fastnumbers

• krona

• numpy

• pandas

• parallel

• python >=3.6

• taxonkit

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install blastmining

and update with:

conda update blastmining

or use the docker container:

docker pull quay.io/biocontainers/blastmining:<tag>

(see blastmining/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/blastmining/README.html)