- recipe bowtie
An ultrafast memory-efficient short read aligner
- Homepage:
- License:
Artistic-2.0-only
- Recipe:
- Links:
biotools: bowtie, doi: 10.1186/gb-2009-10-3-r25
- package bowtie¶
-
- Versions:
1.3.1-4
,1.3.1-3
,1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-2
,1.3.0-1
,1.3.0-0
,1.2.3-2
,1.3.1-4
,1.3.1-3
,1.3.1-2
,1.3.1-1
,1.3.1-0
,1.3.0-2
,1.3.0-1
,1.3.0-0
,1.2.3-2
,1.2.3-1
,1.2.3-0
,1.2.2-1
,1.2.2-0
,1.2.1.1-0
,1.2.0-0
,1.1.2-2
,1.1.2-1
,1.1.2-0
,1.1.1-0
,1.0.0-1
,1.0.0-0
- Depends:
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.12,<1.3.0a0
python
>=3.10,<3.11.0a0
python_abi
3.10.* *_cp310
tbb
>=2021.5.0
zlib
>=1.2.12,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bowtie
and update with:
conda update bowtie
or use the docker container:
docker pull quay.io/biocontainers/bowtie:<tag>
(see bowtie/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bowtie/README.html)