recipe break-point-inspector

BPI uses Manta’s variant calls to re-analyse BAM files and precisely determine the location of the breaks, and applies a set of filters to remove false positives, thereby increasing the accuracy of Manta’s calls.

Homepage

https://github.com/hartwigmedical/hmftools/tree/master/break-point-inspector

License

MIT

Recipe

/break-point-inspector/meta.yaml

package break-point-inspector

(downloads) docker_break-point-inspector

Versions

1.5-11.5-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install break-point-inspector

and update with:

conda update break-point-inspector

or use the docker container:

docker pull quay.io/biocontainers/break-point-inspector:<tag>

(see break-point-inspector/tags for valid values for <tag>)