recipe buscolite

buscolite: busco analysis for gene predictions

Homepage:

https://github.com/nextgenusfs/buscolite

License:

BSD / BSD-2-Clause

Recipe:

/buscolite/meta.yaml

package buscolite

versions:

23.10.26-0

depends augustus:

>=3.5.0

depends miniprot:

depends natsort:

depends pyfastx:

depends pyhmmer:

depends python:

>=3.6

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install buscolite

and update with::

   mamba update buscolite

To create a new environment, run:

mamba create --name myenvname buscolite

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/buscolite:<tag>

(see `buscolite/tags`_ for valid values for ``<tag>``)

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