recipe cassiopee

scan an input genomic sequence (dna/rna/protein) and search for a subsequence with exact match or allowing substitutions (Hamming distance) and/or insertion/deletions

Homepage

https://github.com/osallou/cassiopee-c

License

GPL-3+

Recipe

/cassiopee/meta.yaml

package cassiopee

(downloads) docker_cassiopee

Versions

1.0.5-21.0.5-11.0.5-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cassiopee

and update with:

conda update cassiopee

or use the docker container:

docker pull quay.io/biocontainers/cassiopee:<tag>

(see cassiopee/tags for valid values for <tag>)