- recipe cgat-scripts
Computational Genomics Analysis Toolkit
- Homepage:
- License:
BSD
- Recipe:
- package cgat-scripts¶
-
- Versions:
0.3.2-2
,0.3.2-0
,0.3.1-1
,0.3.1-0
,0.3.0-0
,0.2.7-0
,0.2.6-0
- Depends:
alignlib-lite
0.3.*
bedtools
2.26.*
biopython
1.70.*
coreutils
8.25.*
cython
0.27.*
future
0.16.*
grep
2.14.*
libgcc-ng
>=4.9
libpng
>=1.6.34,<1.7.0a0
matplotlib
2.1.*
numpy
1.12.*
pandas
0.21.*
pybedtools
0.7.*
pybigwig
0.3.*
pysam
0.13.*
python
>=3.5,<3.6.0a0
python-lzo
1.11.*
pyyaml
3.12.*
rpy2
2.8.*
scipy
0.19.*
six
1.11.*
ucsc-bedgraphtobigwig
357.*
ucsc-bedtobigbed
357.*
ucsc-wigtobigwig
357.*
zlib
>=1.2.11,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install cgat-scripts
and update with:
conda update cgat-scripts
or use the docker container:
docker pull quay.io/biocontainers/cgat-scripts:<tag>
(see cgat-scripts/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/cgat-scripts/README.html)