recipe cgatcore

CGAT : the Computational Genomics Analysis Toolkit

Homepage:

https://github.com/cgat-developers/cgat-core

License:

MIT / MIT

Recipe:

/cgatcore/meta.yaml

package cgatcore

Versions:

0.6.15-0,  0.6.14-0,  0.6.11-0,  0.6.10-0,  0.6.9-0,  0.6.7-0,  0.6.5-1,  0.6.5-0,  0.6.4-0, 

0.6.15-0,  0.6.14-0,  0.6.11-0,  0.6.10-0,  0.6.9-0,  0.6.7-0,  0.6.5-1,  0.6.5-0,  0.6.4-0,  0.6.3-1,  0.6.3-0,  0.6.1-1,  0.6.1-0,  0.5.15-1,  0.5.15-0,  0.5.14-0,  0.5.13-0,  0.5.12-1,  0.5.11-0,  0.5.10-0,  0.5.6-0,  0.5.4-0,  0.5.2-0,  0.5.1-0

Depends:

• apsw

• boto3

• coreutils

• drmaa

• ftputil

• gevent

• google-cloud-sdk

• google-cloud-storage

• nomkl

• pandas

• pysftp

• python >=3

• pyyaml >=5.1

• ruffus

• six

• sqlalchemy

• time

Required By:

• cgat-apps

• trnanalysis

• capcruncher

• cgat-daisy

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install cgatcore

and update with:

conda update cgatcore

or use the docker container:

docker pull quay.io/biocontainers/cgatcore:<tag>

(see cgatcore/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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