recipe chap

CHAP is a tool for the functional annotation of ion channel structures

Homepage:

https://github.com/channotation/chap

License:

MIT

Recipe:

/chap/meta.yaml

package chap

versions:

0.9.1-2,  0.9.1-1,  0.9.1-0

depends boost-cpp:

>=1.74.0,<1.74.1.0a0

depends gromacs:

2018.6.*

depends intel-compute-runtime:

depends libcblas:

3.8.0 8_*_netlib

depends libgcc-ng:

>=10.3.0

depends liblapacke:

3.8.0 8_*_netlib

depends libstdcxx-ng:

>=10.3.0

depends rapidjson:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install chap

and update with::

   mamba update chap

To create a new environment, run:

mamba create --name myenvname chap

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/chap:<tag>

(see `chap/tags`_ for valid values for ``<tag>``)

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