recipe chewiesnake

ChewieSnake is a snakemake workflow that performs cgMLST allele calling for a set of assembled genomes using chewBBACA.

Homepage

https://gitlab.com/bfr_bioinformatics/chewieSnake

License

BSD-3

Recipe

/chewiesnake/meta.yaml

package chewiesnake

(downloads) docker_chewiesnake

Versions

3.0.0-23.0.0-13.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install chewiesnake

and update with:

conda update chewiesnake

or use the docker container:

docker pull quay.io/biocontainers/chewiesnake:<tag>

(see chewiesnake/tags for valid values for <tag>)