- recipe clame
CLAME is a binning software for metagenomic reads. It immplements a fm-index search algorithm for nucleotide sequence alignment. Then it uses strongly connected component strategy to bin sequences with similar DNA composition.
- Homepage:
- License:
GPL / GPL-3.0
- Recipe:
- Links:
- package clame¶
-
- Versions:
1.0-1
,1.0-0
- Depends:
_openmp_mutex
>=4.5
libgcc-ng
>=7.3.0
libstdcxx-ng
>=7.3.0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install clame
and update with:
conda update clame
or use the docker container:
docker pull quay.io/biocontainers/clame:<tag>
(see clame/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/clame/README.html)