recipe codingquarry

CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts.

Homepage:

https://sourceforge.net/p/codingquarry/

License:

GPL / GPL-3

Recipe:

/codingquarry/meta.yaml

Links:

doi: 10.1186/s12864-015-1344-4

package codingquarry

Versions:

2.0-6,  2.0-5,  2.0-4,  2.0-3,  2.0-2,  2.0-1,  2.0-0

Depends:

• biopython

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

Required By:

• funannotate

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install codingquarry

and update with:

conda update codingquarry

or use the docker container:

docker pull quay.io/biocontainers/codingquarry:<tag>

(see codingquarry/tags for valid values for <tag>)

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