recipe cogent

COmparative GENomics Toolkit

Homepage:http://www.pycogent.org License:GNU General Public License (GPL) Recipe:/cogent/meta.yaml

package cogent

Versions:

1.9-0, 1.5.3-2, 1.5.3-1, 1.5.3-0

Depends:

• matplotlib >=1.1.0
• mpi4py >=1.0
• mysql-python >=1.2.2
• numpy >=1.3
• python >=2.7,<2.8.0a0
• sqlalchemy >=0.5
• zlib >=1.2.11,<1.3.0a0

Required By:

• primerprospector
• qiime
• picrust
• pynast
• secapr
• probamconvert

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cogent

and update with:

conda update cogent

or use the docker container:

docker pull quay.io/biocontainers/cogent:<tag>

(see cogent/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/cogent/README.html)