recipe cogent

COmparative GENomics Toolkit

Homepage:

http://www.pycogent.org

License:

GNU General Public License (GPL)

Recipe:

/cogent/meta.yaml

package cogent

Versions:

1.9-4,  1.9-3,  1.9-2,  1.9-1,  1.9-0,  1.5.3-2,  1.5.3-1,  1.5.3-0

Depends:

• libgcc-ng >=10.3.0

• matplotlib >=1.1.0

• mpi4py >=1.0

• mysql-python >=1.2.2

• numpy >=1.3

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

• sqlalchemy >=0.5

• zlib >=1.2.11,<1.3.0a0

Required By:

• primerprospector

• qiime

• picrust

• micropita

• pynast

• probamconvert

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install cogent

and update with:

conda update cogent

or use the docker container:

docker pull quay.io/biocontainers/cogent:<tag>

(see cogent/tags for valid values for <tag>)

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Link to this page

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