recipe cogtriangles

low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches



Public Domain




biotools: cogtriangles, doi: 10.1093/bioinformatics/btq229

package cogtriangles

(downloads) docker_cogtriangles



depends libgcc-ng:


depends libstdcxx-ng:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install cogtriangles

and update with::

   mamba update cogtriangles

To create a new environment, run:

mamba create --name myenvname cogtriangles

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `cogtriangles/tags`_ for valid values for ``<tag>``)

Download stats