recipe contatester

Compute the Allelic Balance of a sample from a VCF file.

Homepage:

https://github.com/CNRGH/contatester

License:

CeCILL

Recipe:

/contatester/meta.yaml

Links:

biotools: contatester

Contatester computes the Allelic Balance of a sample from a VCF file, check if a cross human contamination is present and estimate the degree of contamination, using pegasus for high efficiency.

package contatester

(downloads) docker_contatester

Versions:

1.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install contatester

and update with:

conda update contatester

or use the docker container:

docker pull quay.io/biocontainers/contatester:<tag>

(see contatester/tags for valid values for <tag>)

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