recipe cosi2

cosi2 is an efficient coalescent simulator with support for selection, population structure, variable recombination rates, and gene conversion. It supports exact and approximate simulation modes.

Homepage

https://www.broadinstitute.org/mpg/cosi2/

License

GPLv3

Recipe

/cosi2/meta.yaml

package cosi2

(downloads) docker_cosi2

Versions

2.3.0rc4-1, 2.3.0rc4-0, 2.3.0rc3-0, 2.3.0rc2-0, 2.3.0rc1-0, 2.02-1, 2.02-0, 2.0-0

Depends libstdcxx-ng

>=4.9

Depends python

>=2.7,<2.8.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cosi2

and update with:

conda update cosi2

or use the docker container:

docker pull quay.io/biocontainers/cosi2:<tag>

(see cosi2/tags for valid values for <tag>)