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recipe cufflinks¶

Transcriptome assembly and differential expression analysis for RNA-Seq.

Homepage

http://cole-trapnell-lab.github.io/cufflinks/

License

Boost Software License

Recipe

/cufflinks/meta.yaml

Links

biotools: cufflinks

package cufflinks¶

(downloads) docker_cufflinks

Versions

2.2.1-2, 2.2.1-1, 2.2.1-0

Depends
  • python >=2.7,<2.8.0a0

Required By
  • spanki

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cufflinks

and update with:

conda update cufflinks

or use the docker container:

docker pull quay.io/biocontainers/cufflinks:<tag>

(see cufflinks/tags for valid values for <tag>)

Link to this page¶

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/cufflinks/README.html)
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