recipe dagchainer

DAGchainer identifies syntenic regions.

Homepage:

https://github.com/kullrich/dagchainer

License:

MIT

Recipe:

/dagchainer/meta.yaml

Links:

doi: 10.1093/bioinformatics/bth397

DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).

package dagchainer

Versions:

r120920-2,  r120920-1,  r120920-0

Depends:

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• perl-carp

• perl-data-dumper

• perl-getopt-long

• perl-local-lib

• perl-storable

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install dagchainer

and update with:

conda update dagchainer

or use the docker container:

docker pull quay.io/biocontainers/dagchainer:<tag>

(see dagchainer/tags for valid values for <tag>)

Download stats

Link to this page

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