recipe dagchainer

DAGchainer identifies syntenic regions.

Homepage

https://github.com/kullrich/dagchainer

License

MIT

Recipe

/dagchainer/meta.yaml

Links

doi: 10.1093/bioinformatics/bth397

DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).

package dagchainer

(downloads) docker_dagchainer

Versions

r120920-1r120920-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dagchainer

and update with:

conda update dagchainer

or use the docker container:

docker pull quay.io/biocontainers/dagchainer:<tag>

(see dagchainer/tags for valid values for <tag>)