recipe dbcan

Standalone version of dbCAN annotation tool for automated CAZyme annotation

Homepage:

http://bcb.unl.edu/dbCAN2/

Developer docs:

https://github.com/linnabrown/run_dbcan

License:

GPLv3

Recipe:

/dbcan/meta.yaml

package dbcan

Versions:

4.0.0-0,  3.0.7-0,  3.0.6-0

Depends:

• biopython

• diamond

• hmmer

• natsort

• numpy >1.19

• pandas

• prodigal

• psutil

• python

• scipy

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install dbcan

and update with:

conda update dbcan

or use the docker container:

docker pull quay.io/biocontainers/dbcan:<tag>

(see dbcan/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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