recipe dfast_qc

DFAST_QC: Taxonomy and completeness check for prokaryotic genomes

Homepage

https://dfast.nig.ac.jp

Developer docs

https://github.com/nigyta/dfast_qc

License

GPLv3

Recipe

/dfast_qc/meta.yaml

package dfast_qc

Versions

0.2.9-0,  0.2.8-0,  0.2.7-0,  0.2.6-1,  0.2.6-0,  0.2.5-1,  0.2.5-0

Depends

• biopython >=1.7

• blast

• checkm-genome

• ete3

• fastani

• hmmer

• more-itertools

• peewee

• prodigal

• python >=3.7

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dfast_qc

and update with:

conda update dfast_qc

or use the docker container:

docker pull quay.io/biocontainers/dfast_qc:<tag>

(see dfast_qc/tags for valid values for <tag>)

Download stats

Link to this page

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