recipe dig2

dig2 is a simple but flexible in silico digester of protein sequences in the FASTA format. It allows for almost any enzyme to be simulated, including MS/MS enzymes to generate CID or ECD/ETD fragments.

Homepage:

http://www.ms-utils.org/dig2/dig2.html

License:

GPL3

Recipe:

/dig2/meta.yaml

Links:

biotools: dig2

package dig2

(downloads) docker_dig2

versions:

1.0-7,  1.0-6,  1.0-5,  1.0-4,  1.0-3,  1.0-2,  1.0-1,  1.0-0

depends libgcc:

>=13

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install dig2

and update with::

   mamba update dig2

To create a new environment, run:

mamba create --name myenvname dig2

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/dig2:<tag>

(see `dig2/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/dig2/README.html)