recipe dinosaur

Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.

Homepage

https://github.com/fickludd/dinosaur

License

Apache / Apache-2.0

Recipe

/dinosaur/meta.yaml

package dinosaur

(downloads) docker_dinosaur

Versions

1.2.0-01.1.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dinosaur

and update with:

conda update dinosaur

or use the docker container:

docker pull quay.io/biocontainers/dinosaur:<tag>

(see dinosaur/tags for valid values for <tag>)

Notes

This recipe supplies a wrapper shell script around the Dinosaur Java program. By default, Java is called without specifying heap size. If you want to overwrite it you can specify these values after calling the wrapper. If you have _JAVA_OPTIONS set globally this will take precedence. For example run it with "dinosaur -Xmx4g"