recipe dirseq

Work out whether RNAseq reads in general agree with the direction of the gene predicted.

Homepage:

https://github.com/wwood/dirseq

License:

MIT / MIT

Recipe:

/dirseq/meta.yaml

Links:

doi: 10.1038/s41586-018-0338-1

package dirseq

Versions:

0.4.3-0

Depends:

• bedtools

• ruby 2.4.*

• samtools

Required By:

• transcriptm

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install dirseq

and update with:

conda update dirseq

or use the docker container:

docker pull quay.io/biocontainers/dirseq:<tag>

(see dirseq/tags for valid values for <tag>)

Download stats

Link to this page

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