recipe dna-nn

Model and predict short DNA sequence features with neural networks.

Homepage:

https://github.com/lh3/dna-nn

License:

Unknown

Recipe:

/dna-nn/meta.yaml

package dna-nn

versions:

0.1-2,  0.1-1,  0.1-0

depends k8:

depends libgcc:

>=13

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

requirements:

additional platforms:

linux-aarch64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install dna-nn

and update with::

   mamba update dna-nn

To create a new environment, run:

mamba create --name myenvname dna-nn

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/dna-nn:<tag>

(see `dna-nn/tags`_ for valid values for ``<tag>``)

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