recipe dnp-corrprofile

Profile of correlations between the patterns of dinucleotide frequency on forward and reverse strands

Homepage:

https://github.com/erinijapranckeviciene/dnpatterntools

License:

MIT

Recipe:

/dnp-corrprofile/meta.yaml

package dnp-corrprofile

versions:

1.0-5,  1.0-4,  1.0-3,  1.0-2,  1.0-1,  1.0-0

depends bzip2:

>=1.0.8,<2.0a0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends libzlib:

>=1.2.13,<1.3.0a0

depends zlib:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install dnp-corrprofile

and update with::

   mamba update dnp-corrprofile

To create a new environment, run:

mamba create --name myenvname dnp-corrprofile

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/dnp-corrprofile:<tag>

(see `dnp-corrprofile/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/dnp-corrprofile/README.html)