recipe dragonflye

Microbial assembly pipeline for Nanopore reads

Homepage

https://github.com/rpetit3/dragonflye

License

GPL2

Recipe

/dragonflye/meta.yaml

Links

biotools: dragonflye, usegalaxy-eu: dragonflye

package dragonflye

Versions

1.0.4-0,  1.0.3-0,  1.0.2-0,  1.0.1-0,  1.0.0-0

Depends

• any2fasta

• assembly-scan >=0.4.0

• flye

• kmc >=3.1

• medaka

• miniasm

• nanoq

• perl

• perl-file-spec

• perl-findbin

• pigz

• racon

• rasusa

• raven-assembler

• seqtk >=1.3

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dragonflye

and update with:

conda update dragonflye

or use the docker container:

docker pull quay.io/biocontainers/dragonflye:<tag>

(see dragonflye/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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