recipe drax

A pipeline for Detecting Resistome Associated taXa.

Homepage

https://github.com/will-rowe/drax

License

MIT

Recipe

/drax/meta.yaml

package drax

(downloads) docker_drax

Versions

0.0.0-2, 0.0.0-1, 0.0.0-0

Depends bbmap

37.90

Depends fastp

0.12.4

Depends fastqc

0.11.7

Depends groot

0.5

Depends kaiju

1.6.2

Depends krona

2.7

Depends metacherchant

0.1.0

Depends multiqc

1.4

Depends nextflow

0.27.6

Depends r-essentials

1.7.0

Depends samtools

1.4

Depends seqkit

0.7.2

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install drax

and update with:

conda update drax

or use the docker container:

docker pull quay.io/biocontainers/drax:<tag>

(see drax/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/drax/README.html)