recipe drax

A pipeline for Detecting Resistome Associated taXa.

Homepage

https://github.com/will-rowe/drax

License

MIT

Recipe

/drax/meta.yaml

package drax

Versions

0.0.0-4,  0.0.0-3,  0.0.0-2,  0.0.0-1,  0.0.0-0

Depends

• bbmap 37.90

• fastp 0.12.4

• fastqc 0.11.7

• groot 0.5

• kaiju 1.6.2

• krona 2.7

• metacherchant 0.1.0

• multiqc 1.4

• nextflow 0.27.6

• r-essentials 1.7.0

• samtools 1.4

• seqkit 0.7.2

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install drax

and update with:

conda update drax

or use the docker container:

docker pull quay.io/biocontainers/drax:<tag>

(see drax/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/drax/README.html)