recipe dream-stellar

DREAM-Stellar: a fast and accurate pairwise local aligner.

Homepage:

https://github.com/seqan/dream-stellar

License:

BSD / BSD-3-Clause License

Recipe:

/dream-stellar/meta.yaml

DREAM-Stellar can compare pairs of large sequences to find all conserved subsequences.

package dream-stellar

(downloads) docker_dream-stellar

versions:

2.1.0-0

depends bzip2:

>=1.0.8,<2.0a0

depends libgcc:

>=13

depends libstdcxx:

>=13

depends libzlib:

>=1.3.1,<2.0a0

depends yaml-cpp:

>=0.8.0,<0.9.0a0

requirements:

additional platforms:
linux-aarch64

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install dream-stellar

and update with::

   mamba update dream-stellar

To create a new environment, run:

mamba create --name myenvname dream-stellar

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/dream-stellar:<tag>

(see `dream-stellar/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/dream-stellar/README.html)