recipe drug2cell

This is a collection of utility functions for gene group activity evaluation in scanpy

Homepage:

https://github.com/teichlab/drug2cell/

License:

non-commercial license

Recipe:

/drug2cell/meta.yaml

package drug2cell

versions:

0.1.1-0

depends anndata:

depends blitzgsea:

depends numpy:

depends pandas:

>=1.5.3,<2.0

depends python:

>=3.10,<3.11

depends scipy:

depends statsmodels:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install drug2cell

and update with::

   mamba update drug2cell

To create a new environment, run:

mamba create --name myenvname drug2cell

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/drug2cell:<tag>

(see `drug2cell/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/drug2cell/README.html)