recipe ecopcr

ecoPCR is an electronic PCR software that helps you estimate Barcode primers quality.

Homepage:

https://git.metabarcoding.org/obitools/ecopcr/wikis/home

License:

CeCill v2

Recipe:

/ecopcr/meta.yaml

package ecopcr

(downloads) docker_ecopcr

versions:

0.5.0-10.5.0-0

depends libgcc:

depends python:

2.7*

depends reportlab:

depends zlib:

1.2.11*

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ecopcr

and update with::

   mamba update ecopcr

To create a new environment, run:

mamba create --name myenvname ecopcr

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ecopcr:<tag>

(see `ecopcr/tags`_ for valid values for ``<tag>``)

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