recipe ega-cryptor

EGA Cryptor v2.0.0 is a tool designed to encrypt files compliant with the European Genome-phenome Archive (EGA)

Homepage:

https://ega-archive.org/submission/data/file-preparation/egacryptor/

License:

Apache-2.0

Recipe:

/ega-cryptor/meta.yaml

The EGACryptor v.2.0.0 is a JAVA-based application which enables submitters to produce EGA compliant encrypted files along with files for the encrypted and unencrypted md5sum for each file to be submitted. The application will generate an output folder that will by default mirror the directory structure containing the original files. This output folder can subsequently be uploaded to the EGA FTP staging area via an FTP or Aspera client.

package ega-cryptor

(downloads) docker_ega-cryptor

versions:

2.0.0-0

depends openjdk:

>=8,<12

depends python:

>=3.6,<4.0

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ega-cryptor

and update with::

   mamba update ega-cryptor

To create a new environment, run:

mamba create --name myenvname ega-cryptor

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ega-cryptor:<tag>

(see `ega-cryptor/tags`_ for valid values for ``<tag>``)

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Link to this page

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